TAP PcG_MSI in Panicum virgatum

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

WD40
CAF1C_H4-bd
FIE_clipped_for_HMM

(Domain names are clickable)



List of proteins (7)

hide all | show all
namename additionClick button to show/hide sequence: Download sequence?
Pavir.Ca00095.1.ppacid=30204910 transcript=Pavir.Ca00095.1 locus=Pavir.Ca00095 ID=Pavir.Ca00095.1.v1.1 annot-version=v1.1
Pavir.Cb02178.1.ppacid=30268106 transcript=Pavir.Cb02178.1 locus=Pavir.Cb02178 ID=Pavir.Cb02178.1.v1.1 annot-version=v1.1
Pavir.Ha01893.1.ppacid=30317160 transcript=Pavir.Ha01893.1 locus=Pavir.Ha01893 ID=Pavir.Ha01893.1.v1.1 annot-version=v1.1
Pavir.Hb01883.1.ppacid=30264126 transcript=Pavir.Hb01883.1 locus=Pavir.Hb01883 ID=Pavir.Hb01883.1.v1.1 annot-version=v1.1
Pavir.Ia01197.1.ppacid=30210143 transcript=Pavir.Ia01197.1 locus=Pavir.Ia01197 ID=Pavir.Ia01197.1.v1.1 annot-version=v1.1
Pavir.Ib04079.1.ppacid=30241159 transcript=Pavir.Ib04079.1 locus=Pavir.Ib04079 ID=Pavir.Ib04079.1.v1.1 annot-version=v1.1
Pavir.J34844.1.ppacid=30295099 transcript=Pavir.J34844.1 locus=Pavir.J34844 ID=Pavir.J34844.1.v1.1 annot-version=v1.1
select all | unselect

A list of species letter codes included in the protein names can be found here (opens in new tab).

↑ back to top


¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum